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1

Spontaneous Decisions and Free Will: Empirical Results and Philosophical Considerations

Rigato, Joana, Murakami, Masayoshi, Mainen, Zachary

Journal:

Cold Spring Harbor Symposia on Quantitative Biology

Year:

2014

Language:

english

File:

PDF, 633 KB

english, 2014

2

Social cognition in the rodent: nothing to be sniffed at

Rennie, Scott M., Moita, Marta M., Mainen, Zachary F.

Journal:

Trends in Cognitive Sciences

Year:

2013

Language:

english

File:

PDF, 100 KB

english, 2013

3

Synthesis of models for excitable membranes, synaptic transmission and neuromodulation using a common kinetic formalism

Alain Destexhe, Zachary F. Mainen, Terrence J. Sejnowski

Journal:

Journal of Computational Neuroscience

Year:

1994

Language:

english

File:

PDF, 2.96 MB

english, 1994

4

10.1038/20187

Svoboda, Karel, Mainen, Zachary F., Malinow, Roberto

Journal:

Year:

1999

Language:

english

File:

PDF, 295 KB

english, 1999

5

Influence of dendritic structure on firing pattern in model neocortical neurons

Mainen, Zachary F., Sejnowski, Terrence J.

Journal:

Year:

1996

File:

PDF, 839 KB

1996

6

Neural correlates, computation and behavioural impact of decision confidence

Kepecs, Adam, Uchida, Naoshige, Zariwala, Hatim A., Mainen, Zachary F.

Journal:

Year:

2008

Language:

english

File:

PDF, 554 KB

english, 2008

7

How serotonin gates olfactory information flow

Dugué, Guillaume P, Mainen, Zachary F

Journal:

Nature Neuroscience

Year:

2009

Language:

english

File:

PDF, 357 KB

english, 2009

8

Seeing at a glance, smelling in a whiff: rapid forms of perceptual decision making

Uchida, Naoshige, Kepecs, Adam, Mainen, Zachary F.

Journal:

Nature Reviews Neuroscience

Year:

2006

Language:

english

File:

PDF, 383 KB

english, 2006

9

EARLY EVENTS IN OLFACTORY PROCESSING

Wilson, Rachel I., Mainen, Zachary F.

Journal:

Annual Review of Neuroscience

Year:

2006

Language:

english

File:

PDF, 333 KB

english, 2006

10

Neural antecedents of self-initiated actions in secondary motor cortex

Murakami, Masayoshi, Vicente, M Inês, Costa, Gil M, Mainen, Zachary F

Journal:

Nature Neuroscience

Year:

2014

Language:

english

File:

PDF, 1.58 MB

english, 2014

11

Expanding perspectives on cognition in humans, animals, and machines

Gomez-Marin, Alex, Mainen, Zachary F

Journal:

Current Opinion in Neurobiology

Year:

2016

Language:

english

File:

PDF, 420 KB

english, 2016

12

The mechanistic foundation of Weber’s law

Pardo-Vazquez, Jose L., Castiñeiras-de Saa, Juan R., Valente, Mafalda, Damião, Iris, Costa, Tiago, Vicente, M. Inês, Mendonça, André G., Mainen, Zachary F., Renart, Alfonso

Journal:

Nature Neuroscience

Year:

2019

Language:

english

File:

PDF, 25.91 MB

english, 2019

13

10.1038/2812

Mainen, Zachary F., Jia, Zhengping, Roder, John, Malinow, Roberto

Journal:

Nature Neuroscience

Year:

1998

Language:

english

File:

PDF, 181 KB

english, 1998

14

10.1038/28220

Mainen, Zachary F., Jia, Zhengping, Roder, John, Malinow, Roberto

Journal:

Year:

1998

Language:

english

File:

PDF, 111 KB

english, 1998

15

Speed and accuracy of olfactory discrimination in the rat

Uchida, Naoshige, Mainen, Zachary F

Journal:

Nature Neuroscience

Year:

2003

Language:

english

File:

PDF, 377 KB

english, 2003

16

The main olfactory bulb and innate behavior: different perspectives on an olfactory scene

Mainen, Zachary F

Journal:

Nature Neuroscience

Year:

2007

Language:

english

File:

PDF, 169 KB

english, 2007

17

Behavioral analysis of olfactory coding and computation in rodents

Zachary F Mainen

Journal:

Current Opinion in Neurobiology

Year:

2006

Language:

english

File:

PDF, 117 KB

english, 2006

18

Neural representation of behavioral outcomes in the orbitofrontal cortex

Zachary F Mainen, Adam Kepecs

Journal:

Current Opinion in Neurobiology

Year:

2009

Language:

english

File:

PDF, 249 KB

english, 2009

19

LTP mechanisms: from silence to four-lane traffic

Roberto Malinow, Zachary F Mainen, Yasunori Hayashi

Journal:

Current Opinion in Neurobiology

Year:

2000

Language:

english

File:

PDF, 98 KB

english, 2000

20

A model of spike initiation in neocortical pyramidal neurons

Zachary F. Mainen, Jasdan Joerges, John R. Huguenard, Terrence J. Sejnowski

Journal:

Year:

1995

Language:

english

File:

PDF, 1.29 MB

english, 1995

21

Sensory-Evoked Intrinsic Optical Signals in the Olfactory Bulb Are Coupled to Glutamate Release and Uptake

Hirac Gurden, Naoshige Uchida, Zachary F. Mainen

Journal:

Year:

2006

Language:

english

File:

PDF, 415 KB

english, 2006

22

Representation of Spatial Goals in Rat Orbitofrontal Cortex

Claudia E. Feierstein, Michael C. Quirk, Naoshige Uchida, Dara L. Sosulski, Zachary F. Mainen

Journal:

Year:

2006

Language:

english

File:

PDF, 798 KB

english, 2006

23

Neural Substrates of Sensory-Guided Locomotor Decisions in the Rat Superior Colliculus

Gidon Felsen, Zachary F. Mainen

Journal:

Year:

2008

Language:

english

File:

PDF, 1.83 MB

english, 2008

24

Listening to the Crowd: Neuronal Ensembles Rule

Claudia E. Feierstein, Zachary F. Mainen

Journal:

Year:

2010

Language:

english

File:

PDF, 199 KB

english, 2010

25

Convergence in the Piriform Cortex

M. Inês Vicente, Zachary F. Mainen

Journal:

Year:

2011

Language:

english

File:

PDF, 208 KB

english, 2011

26

Odor Representations in Olfactory Cortex: Distributed Rate Coding and Decorrelated Population Activity

Keiji Miura, Zachary F. Mainen, Naoshige Uchida

Journal:

Year:

2012

Language:

english

File:

PDF, 1008 KB

english, 2012

27

Synaptic [Ca2+]: Intracellular Stores Spill Their Guts

Karel Svoboda, Zachary F Mainen

Journal:

Year:

1999

Language:

english

File:

PDF, 117 KB

english, 1999

28

The Limits of Deliberation in a Perceptual Decision Task

Zariwala, Hatim A., Kepecs, Adam, Uchida, Naoshige, Hirokawa, Junya, Mainen, Zachary F.

Journal:

Year:

2013

Language:

english

File:

PDF, 1.18 MB

english, 2013

29

[IEEE 2007 29th Annual International Conference of the IEEE Engineering in Medicine and Biology Society - Lyon, France (2007.08.22-2007.08.26)] 2007 29th Annual International Conference of the IEEE Engineering in Medicine and Biology Society - Low-Power High-Resolution 32-channel Neural Recording System

Yun, Xiao, Kim, Donghwi, Stanacevic, Milutin, Mainen, Zachary

Year:

2007

Language:

english

File:

PDF, 1.79 MB

english, 2007

30

Orbitofrontal Cortex Is Required for Optimal Waiting Based on Decision Confidence

Lak, Armin, Costa, Gil M., Romberg, Erin, Koulakov, Alexei A., Mainen, Zachary F., Kepecs, Adam

Journal:

Year:

2014

Language:

english

File:

PDF, 1.44 MB

english, 2014

31

Big behavioral data: psychology, ethology and the foundations of neuroscience

Gomez-Marin, Alex, Paton, Joseph J, Kampff, Adam R, Costa, Rui M, Mainen, Zachary F

Journal:

Nature Neuroscience

Year:

2014

Language:

english

File:

PDF, 485 KB

english, 2014

32

European Commission: Put brain project back on course

Mainen, Zachary F., Pouget, Alexandre

Journal:

Year:

2014

Language:

english

File:

PDF, 542 KB

english, 2014

33

[IEEE 2008 51st IEEE International Midwest Symposium on Circuits and Systems (MWSCAS) - Knoxville, TN, USA (2008.08.10-2008.08.13)] 2008 51st Midwest Symposium on Circuits and Systems - A low-power low-data-rate neural recording system with adaptive spike detection

Donghwi Kim,, Milutin Stanacevic,, Ridha Kamoua,, Mainen, Zachary

Year:

2008

Language:

english

File:

PDF, 394 KB

english, 2008

34

Activation of Dorsal Raphe Serotonergic Neurons Promotes Waiting but Is Not Reinforcing

Fonseca, Madalena S., Murakami, Masayoshi, Mainen, Zachary F.

Journal:

Current Biology

Year:

2015

Language:

english

File:

PDF, 823 KB

english, 2015

35

Preparing and selecting actions with neural populations: toward cortical circuit mechanisms

Murakami, Masayoshi, Mainen, Zachary F

Journal:

Current Opinion in Neurobiology

Year:

2015

Language:

english

File:

PDF, 754 KB

english, 2015

36

Balanced activity in basal ganglia projection pathways is critical for contraversive movements

Tecuapetla, Fatuel, Matias, Sara, Dugue, Guillaume P., Mainen, Zachary F., Costa, Rui M.

Journal:

Nature Communications

Year:

2014

Language:

english

File:

PDF, 1.85 MB

english, 2014

37

The Functional Microarchitecture of the Mouse Barrel Cortex

Sato, Takashi R., Gray, Noah W., Mainen, Zachary F., Svoboda, Karel

Journal:

Year:

2007

Language:

english

File:

PDF, 1.24 MB

english, 2007

38

Confidence as Bayesian Probability: From Neural Origins to Behavior

Meyniel, Florent, Sigman, Mariano, Mainen, Zachary F.

Journal:

Year:

2015

Language:

english

File:

PDF, 1.47 MB

english, 2015

39

Metacognition: computation, neurobiology and function || A computational framework for the study of confidence in humans and animals

Adam Kepecs and Zachary F. Mainen

Journal:

Philosophical Transactions Biological Sciences

Year:

2012

Language:

english

File:

PDF, 3.16 MB

english, 2012

40

A probabilistic approach to demixing odors

Grabska-Barwińska, Agnieszka, Barthelmé, Simon, Beck, Jeff, Mainen, Zachary F, Pouget, Alexandre, Latham, Peter E

Journal:

Nature Neuroscience

Year:

2016

Language:

english

File:

PDF, 1.79 MB

english, 2016

41

Distinct Sources of Deterministic and Stochastic Components of Action Timing Decisions in Rodent Frontal Cortex

Murakami, Masayoshi, Shteingart, Hanan, Loewenstein, Yonatan, Mainen, Zachary F.

Journal:

Year:

2017

Language:

english

File:

PDF, 2.48 MB

english, 2017

42

Activation of serotonin neurons promotes active persistence in a probabilistic foraging task

Lottem, Eran, Banerjee, Dhruba, Vertechi, Pietro, Sarra, Dario, Lohuis, Matthijs oude, Mainen, Zachary F.

Journal:

Nature Communications

Year:

2018

Language:

english

File:

PDF, 1.01 MB

english, 2018

43

Optogenetic Recruitment of Dorsal Raphe Serotonergic Neurons Acutely Decreases Mechanosensory Responsivity in Behaving Mice

Dugué, Guillaume P., Lörincz, Magor L., Lottem, Eran, Audero, Enrica, Matias, Sara, Correia, Patricia A., Léna, Clément, Mainen, Zachary F., Chacron, Maurice J.

Journal:

Year:

2014

Language:

english

File:

PDF, 2.11 MB

english, 2014

44

An effect of serotonergic stimulation on learning rates for rewards apparent after long intertrial intervals

Iigaya, Kiyohito, Fonseca, Madalena S., Murakami, Masayoshi, Mainen, Zachary F., Dayan, Peter

Journal:

Nature Communications

Year:

2018

Language:

english

File:

PDF, 827 KB

english, 2018

45

Activity patterns of serotonin neurons underlying cognitive flexibility

Matias, Sara, Lottem, Eran, Dugué, Guillaume P, Mainen, Zachary F

Journal:

Year:

2017

Language:

english

File:

PDF, 4.70 MB

english, 2017

46

Learning optimal decisions with confidence

Drugowitsch, Jan, Mendonça, André G., Mainen, Zachary F., Pouget, Alexandre

Journal:

Proceedings of the National Academy of Sciences

Year:

2019

Language:

english

File:

PDF, 1.24 MB

english, 2019

47

Learning optimal decisions with confidence

Drugowitsch, Jan, Mendonça, André G., Mainen, Zachary F., Pouget, Alexandre

Journal:

Proceedings of the National Academy of Sciences

Year:

2019

File:

PDF, 1.24 MB

2019

48

Inference-Based Decisions in a Hidden State Foraging Task: Differential Contributions of Prefrontal Cortical Areas

Vertechi, Pietro, Lottem, Eran, Sarra, Dario, Godinho, Beatriz, Treves, Isaac, Quendera, Tiago, Oude Lohuis, Matthijs Nicolai, Mainen, Zachary F.

Journal:

Year:

2020

File:

PDF, 1.51 MB

2020

49

The impact of learning on perceptual decisions and its implication for speed-accuracy tradeoffs

MendonÃ§a, AndrÃ© G., Drugowitsch, Jan, Vicente, M. InÃªs, DeWitt, Eric E. J., Pouget, Alexandre, Mainen, Zachary F.

Journal:

Nature Communications

Year:

2020

File:

PDF, 1.35 MB

2020

50

Mechanisms of Lateral Inhibition in the Olfactory Bulb: Efficiency and Modulation of Spike-Evoked Calcium Influx into Granule Cells

Egger, Veronica, Svoboda, Karel, Mainen, Zachary F.

Journal:

Journal of Neuroscience

Year:

2003

File:

PDF, 374 KB

2003

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